ENT-00001719 · Scientific Dataset

Protein Data Bank

Protein Data Bank is a protein structure archive associated with RCSB.

Level IV — ConnectedHistoricalConnected

Human readable record

Overview

Protein Data Bank is a documented AI dataset or benchmark associated with RCSB. The record identifies its role in evaluation, training, measurement or comparison of intelligent systems, with emphasis on the source context and the type of capability it helps assess.

Timeline

1971Protein Data Bank public documentation anchor
Protein Data Bank appears in public documentation or stable reference sources as a protein structure archive associated with RCSB.

Capabilities

Data resourceEvaluation supportResearch reference

Known limitations

The record describes the public identity and documented role of the entity, not private implementation details.Capabilities depend on version, deployment context, access conditions and the available public documentation.

Technical and registry detail

Technical description

Structured record for Protein Data Bank. The technical layer identifies entity type, classification, creator or organization, public source anchors, timeline entry, capabilities, limitations, registry status and graph relationships. Source anchor: https://www.rcsb.org/.

Controlled tags

DatasetBenchmarkEvaluation

Relationship graph

Protein Data Bank

Published byRCSB

Protein Data Bank is associated with RCSB through its documented source context.

Machine readable layer

Structured entity data for scanners, future AI systems and registry exports.

{
    "@context": "https://schema.org",
    "@type": "Thing",
    "identifier": "ENT-00001719",
    "name": "Protein Data Bank",
    "alternateName": [],
    "additionalType": "Scientific Dataset",
    "description": "Protein Data Bank is a protein structure archive associated with RCSB.",
    "creator": "RCSB PDB",
    "url": "entity.php?id=ENT-00001719",
    "sameAs": "https://www.rcsb.org/",
    "lxkeysWorld": {
        "classification": "protein structure archive",
        "organization": "RCSB",
        "originContext": "Public AI and technical record",
        "firstPublicAppearance": "1971",
        "currentStatus": "Historical",
        "registryStatus": "Connected",
        "spatiumIndex": {
            "total": 74,
            "documentation": 25,
            "evidence": 13,
            "structure": 25,
            "relationships": 11,
            "level": "Level IV — Connected"
        },
        "lxCalendarium": {
            "start_date_utc": "2023-04-01",
            "created_utc": "2026-06-16T23:59:28+00:00",
            "created_dypclt": "D-0 Y-2 P-3 C-3 L-21 T-3",
            "updated_utc": "2026-06-16T23:59:28+00:00",
            "updated_dypclt": "D-0 Y-2 P-3 C-3 L-21 T-3",
            "reviewed_utc": "2026-06-16T23:59:28+00:00",
            "reviewed_dypclt": "D-0 Y-2 P-3 C-3 L-21 T-3"
        },
        "capabilities": [
            "Data resource",
            "Evaluation support",
            "Research reference"
        ],
        "limitations": [
            "The record describes the public identity and documented role of the entity, not private implementation details.",
            "Capabilities depend on version, deployment context, access conditions and the available public documentation."
        ],
        "tags": [
            "Dataset",
            "Benchmark",
            "Evaluation"
        ],
        "timeline": [
            {
                "date": "1971",
                "title": "Protein Data Bank public documentation anchor",
                "description": "Protein Data Bank appears in public documentation or stable reference sources as a protein structure archive associated with RCSB."
            }
        ],
        "relationships": [
            {
                "target": "RCSB",
                "type": "Published by",
                "description": "Protein Data Bank is associated with RCSB through its documented source context.",
                "evidence_level": "documentary"
            }
        ],
        "sources": [
            {
                "label": "Official dataset or benchmark reference",
                "url": "https://www.rcsb.org/",
                "source_type": "Official Documentation",
                "verification_status": "verified"
            }
        ]
    }
}

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